Good news, I can send/receive mail with 3.2.1 installed.

Had a slight panic, I forgot to do the second install and got the
message I was using the 3.002000 script with 3.002001. Fixed that.

Now I see the list is being tagged again as junk mail. I think there
was a message about whitelists not working right, I'd say mine was one.

whitelist_from_spf *.apache.org
bayes_ignore_to users@spamassassin.apache.org
bayes_ignore_to spamassassin-users@incubator.apache.org
bayes_ignore_from *@spamassassin.apache.org

Headers from a message (it came through our backup MX since I was
down while updating, they ARE on our trusted_networks list):

From: mlv@ll.mit.edu
Subject: *** JUNK MAIL *** Fine-tuning bayes
Date: June 13, 2007 4:12:23 PM PDT
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--
Jerry Durand, Durand Interstellar, Inc.
Los Gatos, California, USA
tel: +1-408-356-3886, USA Toll Free: 866-356-3886
www.interstellar.com, skype: jerrydurand