I recently ran the install and it looks like the patch was off by one line on the following files and it caused it to fail:

common-links.html.tmpl
Constants.pm (two different ones)
Error.pm
Filesystem.pm
header.html.tmpl
Mysql.pm
User.pm (two different ones)
WebService.pm

I tried putting the files directly from the Bugzilla download in place and that did not resolve the issue either so this should be easily reproducable. To solve it I took the rej files and manually inserted them and all was well.

Should this get logged as a bug?

Thanks!
Will